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Dryed out Stem

Anyone see this before its happened to a few plants over the years, just lost a couple plants to this any input would be appreciated
Stemdrying.jpg
 
yup...root rot, or at least that's what it looks like to me....I lost about 40 that I transplanted from starter tray to 5 gallon containers this year because of root rot and they did exactly what this one did..
 
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