Ajdrew, i just downloaded quite a few files from the New Mexico Chile Pepper Institute. Can you tell me where it explained how night temperatures influence flowering in peppers? They were generous with their info... unfortunately, that makes for quite a haystack that i must search through.
My own experience suggests that constant day-and-night temperatures of 75°F can cause 4-6 inch tall plants to bloom prolifically, at least with some C. chinense peppers. Apparently some annuums do the same.
Giving young plants cooler nights (night being whenever the grow lights are off), less than 70°F, seems to prevent this.
By the way, if some of your indoor plants have a significant amount of fruit-set, they may have a different set of nutrient requirements than those that are growing foliage only -- they will need more calcium, possibly more potasium, or other elements.
I don't know your fertilizer regimen -- you may already have sufficient nutrition for your fruit-bearing plants within that regimen. Watch out for blossom-end rot (due to calcium deficiency).