I would suspect the ratio of the genes is different, because they're not the same pepper.
Perhaps a long time ago they were, but not anymore.
Here's the Bhut Jolokia test results:
Perhaps a long time ago they were, but not anymore.
Here's the Bhut Jolokia test results:
Among the 19 samples of C. annuum, C. frutescens, C. chinense, and 'Bhut Jolokia', the scientists obtained 136 reproducible and reliable polymorphic RAPD markers to work with. To sum up the rather complex test results, the researchers found eight RAPD markers specific to C. chinense, as well as three markers specific to C. frutescens. No annuum-specific patterns were detected in this Indian chile, but one that was specific to 'Bhut Jolokia'. The genetic similarities among and within the species were calculated by applying some sophisticated algorithms that would be beyond the scope of this article. At the bottom line, the experts obtained a so-called "similarity index value". A totally pure species would mean a value of 1.00, which is rather rare, as most cultivars (= cultivated varieties) contain genes from more than one species through breeding.
The C. annuum samples included in this analysis for reference delivered a similarity index value of 0.86. Similarly, the C. chinense as well as C. frutescens reference samples showed similarity index values of 0.82 and 0.85, respectively. The C. frutescens and C. chinense clusters merged at the similarity index value of 0.45. The the average genetic similarity between C. chinense and 'Bhut Jolokia' was 0.79, which means this chile clearly belongs to the C.chinense species, but has some C. frutescens genes as well.
According to Dr. Bosland, such a genetic species mix is not uncommon, and it is called "interspecific hybridization". As an example, he mentioned the Greenleaf Tabasco cultivar -- it was developed by interspecific hybridization between C. frutescens and C. chinense, followed by repeated backcrossing to C. frutescens. DNA analysis revealed that 'Greenleaf Tabasco' indeed contains some C. chinense genes.
Considering that various C. frutescens peppers are cultivated in northeastern India as well (Indian PC-1 for example), the presence of some frutescens genes in this chinense cultivar should be no surprise. In Assam, plants of C. chinense and C. frutescens could have been grown near each other, allowing for hybridization between them, Paul Bosland remarked. Quite possibly, local farmers knowingly selected for a higher heat chile pepper, eventually leading to the ultra-hot 'Bhut Jolokia'.